BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023D12LP1|AL428055
(1034 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1508 1391 0.0
>3x_Contig1508
Length = 7899
Score = 1391 bits (701), Expect = 0.0
Identities = 738/745 (99%), Gaps = 4/745 (0%)
Strand = Plus / Minus
Query: 248 ccgtattttttagatac-cttttgtcgttttatgtatacgtttttataccctatcagttt 306
|||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 7899 ccgtattttttagaaaatcttttgtcgtattatgtatacgtttttataccctatcagttt 7840
Query: 307 tcttgcaaattccatacaatcctggaacacagagctatcggcagagcttgcaacttgata 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7839 tcttgcaaattccatacaatcctggaacacagagctatcggcagagcttgcaacttgata 7780
Query: 367 gcttataaacagggccattaatgtttctggttttcgaatggcttaagtatctataaccct 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7779 gcttataaacagggccattaatgtttctggttttcgaatggcttaagtatctataaccct 7720
Query: 427 tgaggcataatttttcagatagataaacttcggaaatagagcaacacctgccaaatgaat 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7719 tgaggcataatttttcagatagataaacttcggaaatagagcaacacctgccaaatgaat 7660
Query: 487 caggtttactggctcatattggtggtactaatccacgcaaaaatcttgtgtcatgcacag 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7659 caggtttactggctcatattggtggtactaatccacgcaaaaatcttgtgtcatgcacag 7600
Query: 547 ggtataacagtgacaaaatacaacactgttcgaataataagaacgaaaaccgtctcaacg 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7599 ggtataacagtgacaaaatacaacactgttcgaataataagaacgaaaaccgtctcaacg 7540
Query: 607 acaacacatttcacaacttcaagaacaattgtttacagaacagcctccggcaccttcacg 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7539 acaacacatttcacaacttcaagaacaattgtttacagaacagcctccggcaccttcacg 7480
Query: 667 gaacaagtgtccacaaaaccaacggccacggacccggatttcaaaacggaaatcctggac 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7479 gaacaagtgtccacaaaaccaacggccacggacccggatttcaaaacggaaatcctggac 7420
Query: 727 gtgcacaactcattacgcaagaaacatcaggtttcatcgctagtttgggctccagaactt 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7419 gtgcacaactcattacgcaagaaacatcaggtttcatcgctagtttgggctccagaactt 7360
Query: 787 gcatctagagcacaaaatttcgccaattcttacgtatgcaacgggcaattagaacactca 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7359 gcatctagagcacaaaatttcgccaattcttacgtatgcaacgggcaattagaacactca 7300
Query: 847 aagctgccttacggagagaaccttgctctaggatataatactacctcagctgttctagca 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7299 aagctgccttacggagagaaccttgctctaggatataatactacctcagctgttctagca 7240
Query: 907 tggtataacgaggtaaaactgtacgattttaacaa-ccacagttcgc-gcaaatacagga 964
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 7239 tggtataacgaggtaaaactgtacgattttaacaacccacagttcgcagcaaatacagga 7180
Query: 965 catttca-ccagctggtatggaaaa 988
||||||| |||||||||||||||||
Sbjct: 7179 catttcacccagctggtatggaaaa 7155
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6273
Number of Sequences: 1807
Number of extensions: 6273
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 1034
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1018
effective length of database: 10,329,639
effective search space: 10515572502
effective search space used: 10515572502
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)